| Protein ZmOrphan173 | |
|---|---|
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ZmOrphan173 is a protein in the Orphans family.
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| Information | |
| Orphans Name: | ZmOrphan173 |
| Species: | Maize |
| Orphans Family: | Orphans |
| Gene Name(Synonym): | |
| Uniprot ID: | K7VCM9 |
Protein ZmOrphan173
ZmOrphan173 is a protein in the Orphans family.
Protein-DNA Interactions
Meme Logos for Maize v4 Gene IDs
| Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
|---|---|---|---|---|---|
| Zm00001d009364 | DAPseq |  |
sequence | fimo | position |
| Zm00001d009364 | DAPseq |  |
sequence | fimo | position |
| Zm00001d009364 | ChIPseq |  |
sequence | fimo | position |
| Zm00001d009364 | PChIPseq |  |
sequence | fimo | position |
Interactions where ZmOrphan173 is the regulator
Interactions where ZmOrphan173 is the target
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Zm00001d009364_T001 from maize genome v4
Amino Acid Sequence
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MFQKDIKRVSVENWKSSGKPTGGFHKKNMVGTLIYMAPEILRKDIHTEKSDVYSFAISINELLTGVVPYTDLRAEAQAHT
VLEMTYTEQQLTAAIVSQGLRPALALPESGAPPTLLSLIQRCWDPDPEKRPSFEDIIDELNIVQKHIVSNASVPSSPVSK
TQNGTIEVHHYQEALNWFNQGELFVKGSSRSDLKNLWSDCFDQSSEYHPTLSWGSFATCGRRETMEDTHFVLPHVSEEND
VFAFGIFDGHRGSAAAEFSVRAVPGFLKQFGQGASPTDALSEAFVRTDIAFREELILHRKSKRIIQKDWHPGCTAITALI
VRNKLFVANAGDCRAILSRKGKPFLLTKDHVASCPNERERVTKAGTEVKWQIDTWRVGSAALQVTRSIGDDDLKPAVTAQ
PEVIETALSADDEFLVMASDGLWDVVSNQDVLSIIKDTVKEPGMCSKRLATEAAERGSKDNITVIVVFLRPVSTAERIY
MFQKDIKRVSVENWKSSGKPTGGFHKKNMVGTLIYMAPEILRKDIHTEKSDVYSFAISINELLTGVVPYTDLRAEAQAHT
VLEMTYTEQQLTAAIVSQGLRPALALPESGAPPTLLSLIQRCWDPDPEKRPSFEDIIDELNIVQKHIVSNASVPSSPVSK
TQNGTIEVHHYQEALNWFNQGELFVKGSSRSDLKNLWSDCFDQSSEYHPTLSWGSFATCGRRETMEDTHFVLPHVSEEND
VFAFGIFDGHRGSAAAEFSVRAVPGFLKQFGQGASPTDALSEAFVRTDIAFREELILHRKSKRIIQKDWHPGCTAITALI
VRNKLFVANAGDCRAILSRKGKPFLLTKDHVASCPNERERVTKAGTEVKWQIDTWRVGSAALQVTRSIGDDDLKPAVTAQ
PEVIETALSADDEFLVMASDGLWDVVSNQDVLSIIKDTVKEPGMCSKRLATEAAERGSKDNITVIVVFLRPVSTAERIY
| Secondary Structure Color Code | |
|---|---|
| BEND | region with high backbone curvature without specific hydrogen bonding |
| HELX_LH_PP_P | left-handed polyproline helix |
| HELX_RH_3T_P | right-handed 3-10 helix |
| HELX_RH_AL_P | right-handed alpha helix |
| HELX_RH_PI_P | right-handed pi helix |
| STRN | beta strand |
| TURN_TY1_P | type I turn |
| UNDETERMINED | no data available |
Nucleotide Sequence
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AGCAAAGGCTCTCCAATACCTACAA...
AGCAAAGGCTCTCCAATACCTACAAATCCTTGGGGTAGTACACAGAGATATAAAACCTGCGAATATTTTGCTAGACAAAGATCTCCATCCATATCTAGCAGATTTTGGCTTAGCCATGTTTCAAAAGGATATTAAGCGTGTCTCAGTTGAGAACTGGAAATCATCTGGCAAGCCTACTGGTGGTTTCCATAAAAAGAATATGGTTGGGACACTAATTTACATGGCACCAGAAATTTTGAGAAAGGATATACATACAGAAAAGTCTGATGTGTATAGCTTTGCAATATCTATCAATGAGCTTCTTACTGGTGTGGTGCCCTATACAGATCTGAGAGCAGAAGCACAGGCACACACTGTTCTTGAAATGACATATACTGAACAACAACTTACAGCAGCAATTGTTTCTCAAGGATTGCGTCCAGCACTTGCCCTTCCTGAATCTGGTGCCCCACCAACTCTTTTGTCACTTATCCAGCGTTGCTGGGATCCTGATCCTGAAAAGAGACCATCATTTGAAGATATAATTGATGAGCTAAATATAGTTCAAAAGCATATAGTTTCAAATGCTTCTGTTCCATCATCTCCTGTCAGCAAGACTCAAAATGGTACCATAGAAGTGCACCATTATCAAGAAGCATTGAACTGGTTCAACCAGGGGGAGCTTTTTGTTAAAGGATCAAGTAGATCAGACCTTAAGAATCTTTGGTCTGATTGTTTTGATCAATCTTCAGAGTACCATCCAACATTAAGTTGGGGCTCTTTTGCAACGTGTGGTCGAAGGGAAACCATGGAAGACACCCATTTTGTACTTCCCCATGTGAGCGAAGAAAATGATGTTTTTGCCTTTGGCATTTTTGATGGCCATAGAGGTTCAGCAGCCGCTGAATTTTCTGTCCGAGCAGTTCCTGGATTTCTCAAGCAATTTGGTCAGGGTGCAAGCCCAACTGACGCTCTTTCAGAAGCGTTTGTAAGGACTGACATAGCATTTCGAGAAGAACTAATTCTTCACCGGAAGTCAAAAAGGATAATTCAAAAAGATTGGCATCCTGGTTGCACGGCAATAACCGCCCTGATAGTGAGAAACAAGCTTTTTGTAGCAAATGCTGGTGATTGCCGAGCAATCCTGAGCCGTAAGGGCAAACCATTTCTGTTGACCAAGGATCATGTTGCTAGTTGCCCAAATGAAAGAGAACGAGTAACAAAGGCGGGGACTGAAGTAAAATGGCAAATAGATACGTGGCGAGTGGGTTCAGCTGCTCTTCAGGTTACAAGGTCAATTGGTGATGATGACCTCAAGCCAGCTGTCACAGCACAACCTGAGGTTATTGAAACTGCTTTATCAGCTGATGATGAGTTCCTGGTGATGGCTAGTGATGGCCTATGGGATGTGGTAAGCAACCAGGACGTGCTGTCAATAATCAAGGACACGGTTAAAGAGCCTGGAATGTGCTCGAAGAGGTTGGCCACGGAGGCTGCGGAGCGGGGCAGCAAAGACAATATCACTGTCATTGTTGTCTTTCTTCGCCCCGTCTCCACAGCTGAGCGAATCTACTGAGTCACCTCCCAAAACCTATTCTCATTAACTTCAGGTGGCCATACCGCACGCCTTCCGCTGTTAAGTCGCAATTTTTGTATTCGATCCACATCGGTTCTCAAGAAGAAAAGAAGCTATACTATACGTCCATTCTTGTATTTGTAGATAGAAGAAACAGCAGCCTCTGCGGCGGCTCTTTTTTTCAATCTTTTGAAACATTTCTCGTGTGTAAACTATGCAAGCTGAATGGATATTGTTGGCATCGATTTGAGCGTCAATCCCTAGAACG
GRMZM2G006554_T01 from maize genome v3
Amino Acid Sequence
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HTILHDIFAAKALQYLQILGVVHRDIKPANILLDKDLHPYLADFGLAMFQKDIKRVSVENWKSSGKPTGGFHKKNMVGTL
IYMAPEILRKDIHTEKSDVYSFAISIK
Nucleotide Sequence
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CATACCATTTTGCACGATATCTTTG...
CATACCATTTTGCACGATATCTTTGCAGCAAAGGCTCTCCAATACCTACAAATCCTTGGGGTAGTACACAGAGATATAAAACCTGCGAATATTTTGCTAGACAAAGATCTCCATCCATATCTAGCAGATTTTGGCTTAGCCATGTTTCAAAAGGATATTAAGCGTGTCTCAGTTGAGAACTGGAAATCATCTGGCAAGCCTACTGGTGGTTTCCATAAAAAGAATATGGTTGGGACACTAATTTACATGGCACCAGAAATTTTGAGAAAGGATATACATACAGAAAAGTCTGATGTGTATAGCTTTGCAATATCTATCAAGTAAGGCGTCTCTCCTCTAGAATTGAATGTAAATGACATCATGCTATTCAGCAACTTCACCCAACAGTACAACATATGTTATTTTT
GRMZM2G074824_T01 from maize genome v3
Amino Acid Sequence
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MASDGLWDVVSNQDVLSIIKDTVKEPGMCSKRLATEAAERGSKDNITVIVVFLRPVSTAERIY
Nucleotide Sequence
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TTCCATTTGCTGTTATAGGATCATG...
TTCCATTTGCTGTTATAGGATCATGTTGCTAGTTGCCCAAATGAAAGAGAACGAGTAACAAAGGCGGGGACTGAAGTAAAATGGCAAATAGATACGTGGCGAGTGGGTTCAGCTGCTCTTCAGGTTACAAGGTCAATTGGTGATGATGACCTCAAGCCAGCTGTCACAGCACAACCTGAGGTTATTGAAACTGCTTTATCAGCTGATGATGAGTTCCTGGTGATGGCTAGTGATGGCCTATGGGATGTGGTAAGCAACCAGGACGTGCTGTCAATAATCAAGGACACGGTTAAAGAGCCTGGAATGTGCTCGAAGAGGTTGGCCACGGAGGCTGCGGAGCGGGGCAGCAAAGACAATATCACTGTCATTGTTGTCTTTCTTCGCCCCGTCTCCACAGCTGAGCGAATCTACTGAGTCACCTCCCAAAACCTATTCTCATTAACTTCAGGTGGCCATACCGCACGCCTTCCGCTGTTAAGTCGCAATTTTTGTATTCGATCCACATCGGTTCTCAAGAAGAAAAGAAGCTATACTATACGTCCATTCTTGTATTTGTAGATAGAAGAAACAGCAGCCTCTGCGGCGGCTCTTTTTTTCAATCTTTTGAAACATTTCTCGTGTGTAAACTATGCAAGCTGAATGGATATTGTTGGCATCGATTTGAGCGTCAATCCCTAGAACGAA
GRMZM2G469012_T01 from maize genome v3
Amino Acid Sequence
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MTYTEQQLTAAIVSQGLRPALALPESGAPPTLLSLIQRCWDPDPEKRPSFEDIIDELNIVQKHIVSNASVPSSPVSKTQN
GTIEVHHYQEALNWFNQGELFVKGSSRSDLKNLWSDCFDQSSEYHPTLSWGSFATCGRRETMEDTHFVLPHVSEENDVFA
FGIFDGHRGSAAAEFSVRAVPGFLKQFGQGASPTDALSEAFVRTDIAFREN
Nucleotide Sequence
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TTTCAGGCACACACTGTTCTTGAAA...
TTTCAGGCACACACTGTTCTTGAAATGACATATACTGAACAACAACTTACAGCAGCAATTGTTTCTCAAGGATTGCGTCCAGCACTTGCCCTTCCTGAATCTGGTGCCCCACCAACTCTTTTGTCACTTATCCAGCGTTGCTGGGATCCTGATCCTGAAAAGAGACCATCATTTGAAGATATAATTGATGAGCTAAATATAGTTCAAAAGCATATAGTTTCAAATGCTTCTGTTCCATCATCTCCTGTCAGCAAGACTCAAAATGGTACCATAGAAGTGCACCATTATCAAGAAGCATTGAACTGGTTCAACCAGGGGGAGCTTTTTGTTAAAGGATCAAGTAGATCAGACCTTAAGAATCTTTGGTCTGATTGTTTTGATCAATCTTCAGAGTACCATCCAACATTAAGTTGGGGCTCTTTTGCAACGTGTGGTCGAAGGGAAACCATGGAAGACACCCATTTTGTACTTCCCCATGTGAGCGAAGAAAATGATGTTTTTGCCTTTGGCATTTTTGATGGCCATAGAGGTTCAGCAGCCGCTGAATTTTCTGTCCGAGCAGTTCCTGGATTTCTCAAGCAATTTGGTCAGGGTGCAAGCCCAACTGACGCTCTTTCAGAAGCGTTTGTAAGGACTGACATAGCATTTCGAGAGAACTAATTCTCACCGGAAGTCAAAAAGGATATTCAAAAGATTGGCATCCTGGTTGCCACGGCATAACGCCTGATAGTGAGAAAACAAGCTTTTGTAGCAAATGCTGTGGATTGCGAGCATCCTTGACCGTAAGGGCAACCAT
Zm00001eb342010_T001 from maize genome v5
Amino Acid Sequence
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MEDTHFVLPHVSEENDVFAFGIFDGHRGSAAAEFSVRAVPGFLKQFGQGASPTDALSEAFVRTDIAFREELILHRKSKRI
IQKDWHPGCTAITALIVRNKLFVANAGDCRAILSRKGKPFLLTKDHVASCPNERERVTKAGTEVKWQIDTWRVGSAALQV
TRSIGDDDLKPAVTAQPEVIETALSADDEFLVMASDGLWDVVSNQDVLSIIKDTVKEPGMCSKRLATEAAERGSKDNITV
IVVFLRPVSTAERIY
Nucleotide Sequence
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GAATCTTTGGTCTGATTGTTTTGAT...
GAATCTTTGGTCTGATTGTTTTGATCAATCTTCAGAGTACCATCCAACATTAAGTTGGGGCTCTTTTGCAACGTGTGGTCGAAGGGAAACCATGGAAGACACCCATTTTGTACTTCCCCATGTGAGCGAAGAAAATGATGTTTTTGCCTTTGGCATTTTTGATGGCCATAGAGGTTCAGCAGCCGCTGAATTTTCTGTCCGAGCAGTTCCTGGATTTCTCAAGCAATTTGGTCAGGGTGCAAGCCCAACTGACGCTCTTTCAGAAGCGTTTGTAAGGACTGACATAGCATTTCGAGAAGAACTAATTCTTCACCGGAAGTCAAAAAGGATAATTCAAAAAGATTGGCATCCTGGTTGCACGGCAATAACCGCCCTGATAGTGAGAAACAAGCTTTTTGTAGCAAATGCTGGTGATTGCCGAGCAATCCTGAGCCGTAAGGGCAAACCATTTCTGTTGACCAAGGATCATGTTGCTAGTTGCCCAAATGAAAGAGAACGAGTAACAAAGGCGGGGACTGAAGTAAAATGGCAAATAGATACGTGGCGAGTGGGTTCAGCTGCTCTTCAGGTTACAAGGTCAATTGGTGATGATGACCTCAAGCCAGCTGTCACAGCACAACCTGAGGTTATTGAAACTGCTTTATCAGCTGATGATGAGTTCCTGGTGATGGCTAGTGATGGCCTATGGGATGTGGTAAGCAACCAGGACGTGCTGTCAATAATCAAGGACACGGTTAAAGAGCCTGGAATGTGCTCGAAGAGGTTGGCCACGGAGGCTGCGGAGCGGGGCAGCAAAGACAATATCACTGTCATTGTTGTCTTTCTTCGCCCCGTCTCCACAGCTGAGCGAATCTACTGAGTCACCTCCCAAAACCTATTCTCATTAACTTCAGGTGGCCATACCGCACGCCTTCCGCTGTTAAGTCGCAATTTTTGTATTCGATCCACATCGGTTCTCAAGAAGAAAAGAAGCTATACTATACGTCCATTCTTGTATTTGTAGATAGAAGAAACAGCAGCCTCTGCGGCGGCTCTTTTTTTCAATCTTTTGAAACATTTCTCGTGTGTAAA
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